FREE Review of Your Books Learn More ›
a person using a calculator

How to Collect Sales Tax on Shopify

Small Business Tips xendoo Team
Share this article

There’s no doubt about it, sales tax is getting more complicated for all e-commerce businesses. Ever since the 2018 Supreme Court ruling on South Dakota v. Wayfair, U.S. states have been free to make their own tax nexus rules.

No longer is it just about having a physical presence in the state — a store, branch office, employee, or stored inventory — in order to trigger nexus. Now more than 40 states have “economic nexus” which includes any business that sells and delivers taxable merchandise or services into the state. And they each have their own specifications for total annual revenue and/or a number of transactions, as well as types of goods and services being sold, that would make you liable for collecting and remitting sales tax.

That means you could be responsible for sales taxes in 40+ different states, whereas just a few years ago it might have been only one: your home state. Here’s how to do it:

Figure Out Where You Need to Collect Tax

This will involve researching each state’s requirements, then estimating — based on current and previous sales records —whether you’re likely to meet their nexus thresholds.

Don’t forget that physical nexus hasn’t gone away. If you use Shopify Fulfillment Network, you’ll need to know the locations of the warehouses they’re shipping your merchandise from. You’ll need to report taxes in each of those states.

Register for a Sales Tax Permit

Information and application forms are available on each state’s Department of Revenue website.

Once registered, you’ll be assigned a sales tax frequency — monthly, quarterly or annually depending on your sales volumes. Be sure to keep a record of the due dates so you don’t get hit with late penalties and interest.

Set Up Tax Collection on Shopify

Fortunately, the platform does a lot of collecting work for you. Once set up, it will automatically calculate the tax for each state and add it to the customer’s purchase.

1. From your Shopify administrator’s page, go to Settings > Taxes

2. Choose the Tax Region

3. Choose from two ways to set the tax rate:

  • Automatic rate calculation
  • Manual rate inputs for the state, county, municipality and shipping charges

4. Exempt certain products if they are not taxable

5. Choose whether to display your prices with taxes included

File Your Return

Although Shopify collects the sales tax from customers, that’s only the first step. It’s up to you to pass that tax money on to the state. There are two ways to do it:

  • Online through each state’s revenue authority website
  • Automatically with your accounting software, if it has a sales tax function
[av_sidebar widget_area=’Blog Post Disclaimer’ av_uid=’av-om2w’]

 

Related Articles

Protecting Profit Margins

Where Profit Slips: How to Control Costs and Protect Margins

Where Profit Slips: How to Control Costs, Protect Margins, and Keep More of What You Earn Revenue can grow. Sales can increase. Your bank balance can still feel tight. Profit does not disappear all at once. It erodes in small, consistent ways across your business. Cost creep. Margin compression. Untracked spending. This is where profit […]

Read More
Business owner reviewing monthly reports

The Financial Reports Every Business Owner Should Review Monthly

Financial decisions rely on what your numbers show. Not guesses. Not assumptions. Not a bank balance check. Clear, consistent reporting creates visibility into performance, position, and cash movement. When reviewed monthly, these reports show where the business stands and where it is headed. Here are three reports to review each month. 1. Profit and Loss […]

Read More

How Organized Bookkeeping Simplifies Tax Season

Tax season highlights the quality of a business’s financial records. Every deduction, revenue figure, and tax calculation depends on the accuracy of the company’s books. When bookkeeping stays organized throughout the year, tax preparation becomes a structured process instead of a last-minute effort to track down missing information. Well-maintained books allow accountants to review financial […]

Read More

Why AI Is Reshaping Accounting — and How Xendoo Is Leading the Shift

Artificial intelligence has moved beyond experimentation and into the operational core of modern businesses. Companies are no longer asking whether AI belongs in their workflows. They are evaluating how deeply it should be integrated. Accounting is one of the areas where this shift has the greatest impact. Financial data influences hiring decisions, expansion plans, access […]

Read More

Why Accurate Bookkeeping Across Franchisees Is Critical for Franchisors

Franchise systems depend on financial consistency. Every franchisee operates under the same brand, pricing model, operational framework, and unit economics. However, without standardized and accurate bookkeeping across locations, franchisors lose visibility into system performance, unit economics, and financial benchmarks. Accurate bookkeeping at the franchisee level is not only an operational necessity. It directly affects financial […]

Read More

Client Accounting Services vs Traditional Accounting

Accounting is a core part of running a business. It affects how performance is measured, how decisions are made, and how confidently a business can plan. As businesses have grown more complex, the way accounting is handled has evolved as well. Today, there are different models for managing accounting work. Traditional accounting and Client Accounting […]

Read More

Why SaaS Businesses Are Switching to Remote Bookkeeping

For many SaaS businesses, bookkeeping starts as an internal task. A founder handles it. An ops lead owns it part-time. Eventually, a junior hire takes it on. That approach works until the business scales. As subscriptions grow, transactions multiply, and revenue models become more complex, bookkeeping stops being a background task and starts influencing real […]

Read More
Free Consult